Dockstore 1.9.0

Highlighted new features include:

  • Preview feature for Galaxy workflow support

  • Performance improvements for a large variety of endpoints

  • GitHub app support in preview to allow for automated update of workflow content

  • Implementation of the TRS v2 final standard

    • TRS v2 beta standard support is deprecated, but still present

  • Capture of file and docker image checksums from GitHub, Quay.io, GitLab, and Docker Hub on workflow snapshot to support immutable workflows (see breakdown for details here)

  • Support for linking ORCID profiles to Dockstore user profiles

    • Currently displayed in organization and stargazer views

  • A large number of usability improvements and fixes to the user interface

  • Partial API migration from swagger 2.0 to openapi 3.0 for the Dockstore API

  • Improved language plugin support so it’s easier for Dockstore to support additional languages (like Galaxy)

  • A large variety of security updates and bug fixes

As always, see our full list of changes on GitHub

Breaking changes

Major

None intended

Minor

  • If upgrading the Dockstore CLI, our Dockstore script has changed and should be downloaded anew from the onboarding wizard

  • The CLI refresh command will be broken until you update to CLI version 1.9.