Dockstore 1.4.0
We’ve just released the next major version of Dockstore!
Highlighted new features include:
support for registering checker workflows, workflows that validate whether a workflow executed successfully to lead-up to the GA4GH workflow testbed
see a presentation and our tutorial in progress at https://github.com/dockstore/dockstore/wiki/WIP-Checker-Workflow-Support-Tutorial
support for the next iteration of the tool registry schema, see v2
usability improvements such as the ability to link to specific versions of workflows such as Sanger 2.0.3, search by workflow or tool language, and sorting by number of stars
user requests such as the ability to link to unencoded workflows
documentation has been moved out to docs.dockstore.org/ allowing us to update it more often
CLI
ability to configure Cromwell and Bunny (rabix) version or use the generic cwl-runner interface to run cwl
ability to POST notifications during workflow execution to a custom endpoint
ability to run unpublished tools and workflows (if you are the owner or in the organization for a tool or workflow)
WIP for displaying CWL visualizations using view.commonwl.org
See a full list of our changes on GitHub.
Breaking changes
Major
Workflow IDs now take into account the source control repo that they were indexed from for example https://dockstore.org/workflows/github.com/h3abionet/h3agatk is the proper home of that workflow as opposed to https://dockstore.org/workflows/h3abionet/h3agatk ### Minor * can no longer change tool or workflow name for entries that have already been created * can no longer change descriptor type of workflows (unless in stub mode)